Introduction | Installation | Dataset | Usage | Interpretation with traffic light colors | Three steps to the result | Quality Assessment | Conclusion | References
Package: reflimR 1.1.0
Georg Hoffmann
reflimR: Reference Limit Estimation Using Routine Laboratory Data
Uses an indirect method based on truncated quantile-quantile plots to estimate reference limits from routine laboratory data: Georg Hoffmann and colleagues (2024) <doi:10.3390/jcm13154397>. The principle of the method was developed by Robert G Hoffmann (1963) <doi:10.1001/jama.1963.03060110068020> and modified by Georg Hoffmann and colleagues (2015) <doi:10.1515/labmed-2015-0104>, and Frank Klawonn and colleagues (2020) <doi:10.1515/labmed-2020-0005>, (2022) <doi:10.1007/978-3-031-15509-3_31>.
Authors:
reflimR_1.1.0.tar.gz
reflimR_1.1.0.zip(r-4.7)reflimR_1.1.0.zip(r-4.6)reflimR_1.1.0.zip(r-4.5)
reflimR_1.1.0.tgz(r-4.6-any)reflimR_1.1.0.tgz(r-4.5-any)
reflimR_1.1.0.tar.gz(r-4.7-any)reflimR_1.1.0.tar.gz(r-4.6-any)
reflimR_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
reflimR/json (API)
| # Install 'reflimR' in R: |
| install.packages('reflimR', repos = c('https://reflim.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/reflim/reflimr/issues
Datasets:
- livertests - Dataset: livertests
- targetvalues - Dataset: target values
Last updated from:4d1cb3526a. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 115 | ||
| source / vignettes | OK | 169 | ||
| linux-release-x86_64 | OK | 124 | ||
| macos-release-arm64 | OK | 159 | ||
| macos-oldrel-arm64 | OK | 177 | ||
| windows-devel | OK | 69 | ||
| windows-release | OK | 84 | ||
| windows-oldrel | OK | 73 | ||
| wasm-release | OK | 91 |
Exports:adjust_digitsbowleyconf_int95iboxplotinterpretationlognormpermissible_uncertaintyreflimri_histtruncated_qqplot
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Plausible Rounding | adjust_digits |
| Bowley skewness | bowley |
| Confidence intervals of estimated reference limits | conf_int95 |
| Dataset: livertests | livertests |
| Dataset: target values | targetvalues |
| Removal of pathological values | iboxplot |
| Colors and text modules to interprete deviations from given target values | interpretation |
| Lognormal distribution model | lognorm |
| Tolerance intervals of estimated and target limits | permissible_uncertainty |
| Reference limits (main function) | reflim |
| Histogram with density plots and reference limits | ri_hist |
| Quantile-Quantile plot of truncated laboratory results | truncated_qqplot |